Trans-meQTLs across different cancer types

In trans-meQTL analyses, we identified 965,050 trans-meQTLs at FDR < 0.05 and |r|>=0.3 in 23 cancer types for users to search or browse.

     

e.g., "BLCA"
e.g., "rs4975682"
e.g., "cg25599786"
e.g., "PDCD6"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Methylation probe
Methylation position (hg19)
Gene symbol
Beta
t-stat
r
p-valule
Display
BLCA rs1008066 chr3:125755889 T/C cg26321609 chr3:123680480 CCDC14 -1.18 -25.38 -0.79 7.81E-84 Box Plot
BLCA rs10751619 chr11:50298111 C/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.38 -0.78 1.04E-79 Box Plot
BLCA rs10758189 chr9:33125804 A/G cg04842962 chr6:43655489 MRPS18A 1 24.14 0.78 1.01E-78 Box Plot
BLCA rs10758189 chr9:33125804 A/G cg20290983 chr6:43655470 MRPS18A 1.01 24.81 0.79 1.68E-81 Box Plot
BLCA rs10758192 chr9:33131651 G/A cg04842962 chr6:43655489 MRPS18A 1.05 26.95 0.81 3.27E-90 Box Plot
BLCA rs10758192 chr9:33131651 G/A cg20290983 chr6:43655470 MRPS18A 1.06 26.84 0.81 9.01E-90 Box Plot
BLCA rs10794220 chr11:50224384 C/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.2 -0.78 5.73E-79 Box Plot
BLCA rs10794223 chr11:50241472 A/G cg15704280 chr7:45808275 SEPT13 -1.03 -24.52 -0.78 2.64E-80 Box Plot
BLCA rs10794230 chr11:50335852 T/C cg15704280 chr7:45808275 SEPT13 -1.03 -24.66 -0.78 7.53E-81 Box Plot
BLCA rs10794233 chr11:50354541 C/A cg15704280 chr7:45808275 SEPT13 -1.03 -24.56 -0.78 1.87E-80 Box Plot
BLCA rs10901908 chr11:50260213 A/G cg15704280 chr7:45808275 SEPT13 -1.02 -24.49 -0.78 3.7E-80 Box Plot
BLCA rs10901914 chr11:50288086 G/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.16 -0.78 8.75E-79 Box Plot
BLCA rs10901922 chr11:50297286 G/T cg15704280 chr7:45808275 SEPT13 -1.02 -24.32 -0.78 1.88E-79 Box Plot
BLCA rs10901926 chr11:50342026 A/C cg15704280 chr7:45808275 SEPT13 -1.03 -24.16 -0.78 8.24E-79 Box Plot
BLCA rs10901934 chr11:50367598 T/C cg15704280 chr7:45808275 SEPT13 -1.02 -24.54 -0.78 2.19E-80 Box Plot